DisGeNET - a database of gene-disease associations

List of associated variants

Glioblastoma, C0017636

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs6062302	RTEL1 ; RTEL1-TNFRSF6B	0.882	0.040	20	63689615	synonymous variant	T/C	snv	0.74	0.81	4
rs2297440	RTEL1 ; RTEL1-TNFRSF6B	0.763	0.080	20	63680946	intron variant	T/C	snv		0.81	10
rs10464870	CCDC26	0.882	0.040	8	129465577	intron variant	C/T	snv		0.80	3
rs8957	SLC2A4RG	0.925	0.040	20	63742354	missense variant	G/T	snv	0.71	0.78	2
rs20541	IL13 ; TH2LCRR	0.585	0.720	5	132660272	missense variant	A/G	snv	0.72	0.77	52
rs6971	TSPO	0.742	0.200	22	43162920	missense variant	A/G	snv	0.76	0.75	11
rs25487	XRCC1	0.441	0.800	19	43551574	missense variant	T/C	snv	0.68	0.71	205
rs1800871	IL19 ; IL10	0.508	0.800	1	206773289	5 prime UTR variant	A/G	snv		0.69	108
rs2010963	VEGFA	0.542	0.840	6	43770613	5 prime UTR variant	C/G	snv		0.68	82
rs2562152	RHBDF1	0.882	0.040	16	73898	intron variant	A/T	snv		0.67	4
rs7003908	PRKDC	0.716	0.320	8	47858141	intron variant	C/A	snv		0.66	16
rs4977756	CDKN2B-AS1	0.683	0.440	9	22068653	intron variant	G/A	snv		0.64	24
rs1128503	ABCB1	0.564	0.760	7	87550285	synonymous variant	A/G	snv	0.54	0.63	64
rs2440472	AMFR	0.827	0.080	16	56402912	intron variant	A/G	snv		0.61	5
rs1005230	VEGFA	0.827	0.040	6	43768759	upstream gene variant	T/C	snv		0.60	5
rs145929329	CDKN2B-AS1	0.882	0.040	9	22066213	intron variant	TTTT/-;T;TT;TTT;TTTTT;TTTTTT;TTTTTTTTTT	delins		0.58	3
rs4652	LGALS3	0.752	0.200	14	55138318	missense variant	A/C	snv	4.1E-06; 0.45	0.57	12
rs11615	ERCC1	0.572	0.640	19	45420395	synonymous variant	A/G	snv	0.50	0.55	62
rs723527	EGFR	0.882	0.040	7	55067179	intron variant	A/G	snv		0.53	4
rs2736100	TERT	0.550	0.880	5	1286401	3 prime UTR variant	C/A	snv		0.52	83
rs3788266	S100B	0.732	0.160	21	46606442	upstream gene variant	G/A	snv		0.50	12
rs12230172	LOC105369844	0.882	0.040	12	75848895	intron variant	A/G	snv		0.48	4
rs2235573	SLC16A8	0.882	0.040	22	38081923	synonymous variant	G/A	snv	0.47	0.46	4
rs3829382	FLT3	0.925	0.040	13	28003551	3 prime UTR variant	G/T	snv		0.46	2
rs7325927	FAM155A-IT1 ; FAM155A	0.925	0.040	13	107823165	intron variant	C/T	snv		0.38	2